Browse of TCMCG007C17616 protein

CDS

Accession Number	TCMCG007C17616
gbkey	CDS
Protein Id	XP_009131663.1
Location	complement(join(3657258..3657458,3657546..3657752,3657830..3658002,3658100..3658304,3658383..3658510,3658601..3658688,3658779..3658922,3659036..3659179,3659280..3659423,3659501..3659620,3659720..3659822,3659918..3659994,3660089..3660259,3660342..3660418,3660516..3660684,3660771..3660915,3661020..3661231,3661299..3661508,3661582..3661675,3661782..3661933,3662033..3662228,3662339..3662403,3662487..3662556,3662710..3662802,3662897..3662967,3663056..3663175,3663300..3663377,3663554..3663618,3663704..3663776,3664059..3664112))
Gene	LOC103856306
GeneID	103856306
Organism	Brassica rapa

Protein

Length	1282aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA249065
db_source	XM_009133415.3
Definition	protein PIR [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category	S
Description	Cytoplasmic Fragile-X interacting family
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03019        [VIEW IN KEGG]
KEGG_ko	ko:K05749        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko03013        [VIEW IN KEGG] ko04810        [VIEW IN KEGG] map03013        [VIEW IN KEGG] map04810        [VIEW IN KEGG]
GOs	GO:0000902        [VIEW IN EMBL-EBI] GO:0000904        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0006996        [VIEW IN EMBL-EBI] GO:0007010        [VIEW IN EMBL-EBI] GO:0007015        [VIEW IN EMBL-EBI] GO:0008064        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0009653        [VIEW IN EMBL-EBI] GO:0009888        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010026        [VIEW IN EMBL-EBI] GO:0010090        [VIEW IN EMBL-EBI] GO:0010638        [VIEW IN EMBL-EBI] GO:0016043        [VIEW IN EMBL-EBI] GO:0030029        [VIEW IN EMBL-EBI] GO:0030036        [VIEW IN EMBL-EBI] GO:0030154        [VIEW IN EMBL-EBI] GO:0030832        [VIEW IN EMBL-EBI] GO:0030833        [VIEW IN EMBL-EBI] GO:0030838        [VIEW IN EMBL-EBI] GO:0031209        [VIEW IN EMBL-EBI] GO:0031334        [VIEW IN EMBL-EBI] GO:0032271        [VIEW IN EMBL-EBI] GO:0032273        [VIEW IN EMBL-EBI] GO:0032502        [VIEW IN EMBL-EBI] GO:0032535        [VIEW IN EMBL-EBI] GO:0032956        [VIEW IN EMBL-EBI] GO:0032970        [VIEW IN EMBL-EBI] GO:0032989        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0033043        [VIEW IN EMBL-EBI] GO:0043254        [VIEW IN EMBL-EBI] GO:0044087        [VIEW IN EMBL-EBI] GO:0044089        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0045010        [VIEW IN EMBL-EBI] GO:0048468        [VIEW IN EMBL-EBI] GO:0048518        [VIEW IN EMBL-EBI] GO:0048522        [VIEW IN EMBL-EBI] GO:0048856        [VIEW IN EMBL-EBI] GO:0048869        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050794        [VIEW IN EMBL-EBI] GO:0051128        [VIEW IN EMBL-EBI] GO:0051130        [VIEW IN EMBL-EBI] GO:0051493        [VIEW IN EMBL-EBI] GO:0051495        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0065008        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0090066        [VIEW IN EMBL-EBI] GO:0090558        [VIEW IN EMBL-EBI] GO:0090626        [VIEW IN EMBL-EBI] GO:0097435        [VIEW IN EMBL-EBI] GO:0110053        [VIEW IN EMBL-EBI] GO:1902903        [VIEW IN EMBL-EBI] GO:1902905        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGCGGTTCCTGTAGAGGAAGCAATCGCAGCTCTTTCCACTTTCTCCTTAGAGGATGAACAACCAGAAGTACAAGGACCGGCTGTGATGGTTTCAGCTGAAAGAGCTGCAACTGATAGTCCCATCGAGTATAGTGATGTTGCAGCATACCGGTTATCTCTATCAGAAGACACAAAAGCTCTTAACCAGCTGAATACGCTTATACAAGAAGGAAAAGAGATGGCTTCAATTCTCTATACATATAGAAGCTGCGTCAAAGCACTGCCTCAGCTTCCCGAATCTATGAAGCATAGCCAGGCAGATTTGTATCTAGAGACATATCAAGTTTTGGACTTAGAAATGAGCCGTTTACGCGAAATTCAGAGATGGCAATCGTCGGCTTCAGCTAAACTAGCTGCTGATATGCAGAGGTTTTCAAGACCTGAAAGGCGAATCAATGGCCCCACAGTCACACATCTTTGGTCAATGCTGAAGTTGCTTGATGTCTTGGTTCAGCTTGACCATCTTAAAAATGCTAAAGCTAGCATTCCTAATGATTTCTCTTGGTATAAAAGAACATTCACTCAAGTCAGTGCACAGTGGCAAGATACGGATACCATGAGAGAAGAGTTAGATGACTTACAGATTTTCCTGAGCACAAGATGGGCTATTTTACTCAACTTGCATGTTGAGATGTTCCGTGTGAACAATGTGGAAGACATTCTCCAAGTACTCATAGTCTTCATTGTTGAGTCTCTGGAGTTGGATTTCGCACTCCTTTTTCCTGAGAGGTATATTCTTCTCCGAGTCTTGCCCGTTCTTGTTGTCTTAGCAACGCCATCAGAGAAAGATACCGAGGCTTTATACAAGAGGGTGAAACTCAACAGAATGATCAACATTTTCAAGAATGATCCTGTCATTCCTGCGTTTCCAGATCTCCATCTTTCTCCTGCTGCAATTTTGAAAGAACTGTCAGTATACTTTCAAAAGTTCTCATCACAGACTCGCCTTCTGACTCTTCCAGCACCTCATGAGCTCCCTCCACGTGAAGCTCTAGAATATCAGAGGCATTATTTGATAGTTAACCACATTGGAGCTCTCCGTGCTGAGCACGACGATTTCACAATCCGATTTGCTTCATCCATGAATCAGTTATTGCTGTTGAAGTCAAATGATGGAGCATACACTGAATGGTGCAGAGAGGTGAAAGGCAACATGTATGATATGGTTGTTGAAGGTTTCCAACTGCTTAGCAGATGGACTGCACGCATCTGGGAGCAATCTGCTTGGAAATTCTCTCGCCCGTGTAGGGATGCAGCAGAGACGCAAGAGGCCTCCGGGTCATATTCTGATTACGAGAAGGTGGTGAGGTACAATTACACTGCAGAAGAAAGGAGAGCCTTGGTAGAACTTGTTGGCTATATAAAGAGTGTAGGATCGATGCTTCAGCGCTGTGACACGTTAGTTGCAGATGCTTTATGGGAGACAATACATGCCGAAGTTCAAGATTTTGTACAAAACACGTTAGCCACGATGTTGCGTACCACCTTCCGAAAGAAGAAAGATCTCTCAAGGATTCTTTCTGATATGCGGACACTTTCAGCTGACTGGATGGCAAACACCAGGCCCGAACATGAGATGCCATCTTCACAACACGGAGGTGATGAGAGTAAAGCGAACTTCTTTTATCCGAGGCCAGTTGCCCCAACAGCAGCACAGGTGCACTGCTTGCAGTTTTTGATATATGAGGTTGTCTCTGGTGGTAATCTGAGGAGGCCAGGGGGATTCTTTGGAAATAATGGCTCTGAGATTCCTGTTAATGACCTAAAGCAACTGGAGACTTTCTTTTACAAGCTCAGCTTTTTTCTGCACATATTGGATTACTCAGCAAGTATTGGGATATTGACTGATCTGGGGTTCCTGTGGTTTAGAGAATTTTACCTGGAGTCTTCACGTGTTATTCAGTTCCCGATTGAGTGTTCACTACCATGGATGCTGATAGACCACATTCTCGAAGCCCCAAATTCAGGCCTTCTTGAGAGTGTTCTGCTGCCTTTTGACATTTATAATGACTCAGCTCAACAAGCACTGGTTGTGCTTAGGCAGAGGTTCCTCTATGATGAAATTGAGGCTGAGGTGGACCATGGTTTTGATATATTTGTATCAAGACTCTCGGAGTCTATATTCACATATTACAAGAGCTGGTCAGCAAGTGAGCTTCTTGATCCATCATTTCTCTTTGCCTTGGACAATGGTGAAAAGTTCTCCATCCAGCCTGTGAGGTTTACTGCGTTATTTAAGATGACAAAAGTAAAGATACTTGGTAGAACAATTAATTTAAGAAGTTTGATCGCTCAAAGGATGAACAAAACTTTTAGAGAGAATCTGGAGTTTCTCTTTGATCGTTTTGAGTCCCAGGACCTATGTGCTGTAGTGGAACTGGAGAAGCTCATAGATATCCTAAAGCACTCGCATGAACTGCTTTCACAAGATCTTACAATAGATCCTTTCAGCCTAATGCTGAATGAAATGCAAGAAAACATCTCTCTTGTCTCATTCTCCAGTCGACTTGCTACACAGATATGGTCAGAGATGCAGAGTGATTTCCTACCAAACTTCATACTTTGCAACACCACACAGAGATTTGTCCGCTCCTCGAAGGTTCCTCCTACTCAAAAACCATCAGTGCCTTCTGCTAAGCCTAGTTTCTACTGTGGCACTCAAGACTTAAATGCAGCACATCAAAGTTTTGCACGGTTGCATAGCGGATTTTTCGGTATACCACATCTGTTTTCCATAGTTAAACTTCTTGGATCCAGATCATTGCCTTGGCTTATAAGAGCGCTGCTGGATCATATATCAAATAAGATAACAACACTAGAGCCAATGATCTCTGGATTGCAAGAAGCATTGCCCAAGTCTATCGGATTGCTTTCTTTCGATGGTGGTGTTGCAGGCTGTATGAGGCTTATTAGAGAGCAACTAAACTGGGGAACAAAGGCAGAACTCAAAACAGAAGTTCTACGTGGAATAAAAGAAATTGGAAGTGTGATATATACAATGGGACTTCTCGACATTGTATTGAGAGAAGTAGACACAAAGCGTTTCATGCAGACAGCTCCATGGTTGGGTTTAATCCCAGGCGCAGAAGGACAGATAGTTAACGCTCAAGAAGGCGAAAGCCCACTTGTCAATCTCCTAAAGTCAGCGACTTCTGCTGTCGTGTCCAGTCCTGGTTGTCTTAATCCAGCAGCGTTCTACACCATGTCAAAACAAGCAGAAGCTGCAGATCTTTTGTACAAGGCAAACATGAACGGTGGAAGCGTTCTTGAATACACACTTGCATTCACAAGCGCTTCGCTTGACAAGTACTGCAGTAAATGGAGTGCTCCTCCAAAGACGGGATTCGTCGATATCACAACTTCAAAGGATTTTTACCGCATTTACGGTGGTCTTCAGATCGGATATCTGGAGGAGATAACAGTTCCACAATCAGCTCAACAAGAAGTCCTCGGTGATTCGATAGCTTGGGGTGGTTGCACCATCATTTACCTGCTAGGACAGCAACTTCACTTTGAGTTGTTTGATTTCTCGTACCAAGTACTCAATGTCTCTGAGGTTGAGACCGTGTCTGCTTCACATACTCATAGGAATCCTCAGGTTCTCCAGGGATGGGAAGGTTTGTTGGAAGGGATGAAGAAAGCTCGGAGGCTGAACAACCATGTCTTCTCCATGCTCAAAGCTCGTTGTCCACTCGAAGACAAAACTGCTTGCGCCATCAAACAGAGCGGCGCACCGCTACCACGTGTGAGGTTTGAGAATACTGTCTCTGCCTTTGAGTCTCTACCTCAGAAAGGAACCGTTGGGTGA

Protein:   MAVPVEEAIAALSTFSLEDEQPEVQGPAVMVSAERAATDSPIEYSDVAAYRLSLSEDTKALNQLNTLIQEGKEMASILYTYRSCVKALPQLPESMKHSQADLYLETYQVLDLEMSRLREIQRWQSSASAKLAADMQRFSRPERRINGPTVTHLWSMLKLLDVLVQLDHLKNAKASIPNDFSWYKRTFTQVSAQWQDTDTMREELDDLQIFLSTRWAILLNLHVEMFRVNNVEDILQVLIVFIVESLELDFALLFPERYILLRVLPVLVVLATPSEKDTEALYKRVKLNRMINIFKNDPVIPAFPDLHLSPAAILKELSVYFQKFSSQTRLLTLPAPHELPPREALEYQRHYLIVNHIGALRAEHDDFTIRFASSMNQLLLLKSNDGAYTEWCREVKGNMYDMVVEGFQLLSRWTARIWEQSAWKFSRPCRDAAETQEASGSYSDYEKVVRYNYTAEERRALVELVGYIKSVGSMLQRCDTLVADALWETIHAEVQDFVQNTLATMLRTTFRKKKDLSRILSDMRTLSADWMANTRPEHEMPSSQHGGDESKANFFYPRPVAPTAAQVHCLQFLIYEVVSGGNLRRPGGFFGNNGSEIPVNDLKQLETFFYKLSFFLHILDYSASIGILTDLGFLWFREFYLESSRVIQFPIECSLPWMLIDHILEAPNSGLLESVLLPFDIYNDSAQQALVVLRQRFLYDEIEAEVDHGFDIFVSRLSESIFTYYKSWSASELLDPSFLFALDNGEKFSIQPVRFTALFKMTKVKILGRTINLRSLIAQRMNKTFRENLEFLFDRFESQDLCAVVELEKLIDILKHSHELLSQDLTIDPFSLMLNEMQENISLVSFSSRLATQIWSEMQSDFLPNFILCNTTQRFVRSSKVPPTQKPSVPSAKPSFYCGTQDLNAAHQSFARLHSGFFGIPHLFSIVKLLGSRSLPWLIRALLDHISNKITTLEPMISGLQEALPKSIGLLSFDGGVAGCMRLIREQLNWGTKAELKTEVLRGIKEIGSVIYTMGLLDIVLREVDTKRFMQTAPWLGLIPGAEGQIVNAQEGESPLVNLLKSATSAVVSSPGCLNPAAFYTMSKQAEAADLLYKANMNGGSVLEYTLAFTSASLDKYCSKWSAPPKTGFVDITTSKDFYRIYGGLQIGYLEEITVPQSAQQEVLGDSIAWGGCTIIYLLGQQLHFELFDFSYQVLNVSEVETVSASHTHRNPQVLQGWEGLLEGMKKARRLNNHVFSMLKARCPLEDKTACAIKQSGAPLPRVRFENTVSAFESLPQKGTVG